Add NormalCase form and related views for managing normal cases

This commit is contained in:
Ross
2025-11-13 22:08:55 +00:00
parent d259d0e8dd
commit 5ac998454b
6 changed files with 230 additions and 57 deletions
+117 -3
View File
@@ -457,6 +457,8 @@ def case_detail(request, pk):
can_edit = case.check_user_can_edit(request.user)
is_atlas_editor = request.user.is_superuser or request.user.groups.filter(name="atlas_editor").exists()
is_case_author = case.author.filter(id=request.user.id).exists()
can_mark_normal = is_atlas_editor or is_case_author or request.user.is_superuser
return render(
request,
@@ -466,6 +468,8 @@ def case_detail(request, pk):
"cimar_sid": request.user.userprofile.cimar_sid,
"can_edit": can_edit,
"is_atlas_editor": is_atlas_editor,
"is_case_author": is_case_author,
"can_mark_normal": can_mark_normal,
},
)
@@ -481,8 +485,11 @@ def toggle_case_normal(request, pk):
"""
case = get_case_for_case_detail(pk)
# Permission: atlas editors or superusers
if not (request.user.is_superuser or request.user.groups.filter(name="atlas_editor").exists()):
# Permission: atlas editors, case authors, or superusers
is_atlas_editor = request.user.is_superuser or request.user.groups.filter(name="atlas_editor").exists()
is_case_author = case.author.filter(id=request.user.id).exists()
can_mark_normal = is_atlas_editor or is_case_author or request.user.is_superuser
if not can_mark_normal:
return HttpResponse(status=403)
# If already marked normal, unmark (delete the NormalCase)
@@ -549,14 +556,121 @@ def toggle_case_normal(request, pk):
NormalCase.objects.create(case=case, age_years=age, added_by=request.user)
# Render the updated fragment
# Recompute flags for the fragment render
is_atlas_editor = request.user.is_superuser or request.user.groups.filter(name="atlas_editor").exists()
is_case_author = case.author.filter(id=request.user.id).exists()
can_mark_normal = is_atlas_editor or is_case_author or request.user.is_superuser
html = render_to_string(
"atlas/partials/_normal_toggle.html",
{"case": case, "user": request.user, "is_atlas_editor": is_atlas_editor},
{"case": case, "user": request.user, "is_atlas_editor": is_atlas_editor, "is_case_author": is_case_author, "can_mark_normal": can_mark_normal},
request=request,
)
return HttpResponse(html)
@login_required
def case_normal_form(request, pk):
"""Return an HTMX modal with a NormalCaseForm prepopulated with auto-extracted values."""
case = get_case_for_case_detail(pk)
# Permission check: allow atlas editors, case authors, or superusers
is_atlas_editor = request.user.is_superuser or request.user.groups.filter(name="atlas_editor").exists()
is_case_author = case.author.filter(id=request.user.id).exists()
can_mark_normal = is_atlas_editor or is_case_author or request.user.is_superuser
if not can_mark_normal:
return HttpResponse(status=403)
# Extract defaults
age = None
inferred_examination = None
inferred_modality = None
try:
for series in case.series.all():
img = series.images.filter(removed=False).first()
if not img:
continue
ds = img.get_dicom_data()
if not ds:
continue
pa = getattr(ds, "PatientAge", None)
if pa:
import re
m = re.search(r"(\d+)", str(pa))
if m:
age = int(m.group(1))
break
pbd = getattr(ds, "PatientBirthDate", None)
sdate = getattr(ds, "StudyDate", None) or getattr(ds, "AcquisitionDate", None) or getattr(ds, "SeriesDate", None)
if pbd and sdate:
from datetime import datetime
try:
bd = datetime.strptime(str(pbd), "%Y%m%d")
sd = datetime.strptime(str(sdate), "%Y%m%d")
years = round((sd - bd).days / 365.25)
age = int(years)
break
except Exception:
pass
# Try inferring exam/modality from first series
first_series = case.series.first()
if first_series is not None:
inferred_examination = getattr(first_series, "examination", None)
inferred_modality = getattr(first_series, "modality", None)
except Exception:
pass
# Build form with initial values
from .forms import NormalCaseForm
form = NormalCaseForm(initial={
"age_years": age,
"examination": inferred_examination,
"modality": inferred_modality,
})
html = render_to_string("atlas/partials/_normal_form.html", {"form": form, "case": case}, request=request)
return HttpResponse(html)
@login_required
@require_POST
def create_case_normal(request, pk):
case = get_case_for_case_detail(pk)
# Permission check: allow atlas editors, case authors, or superusers
is_atlas_editor = request.user.is_superuser or request.user.groups.filter(name="atlas_editor").exists()
is_case_author = case.author.filter(id=request.user.id).exists()
can_mark_normal = is_atlas_editor or is_case_author or request.user.is_superuser
if not can_mark_normal:
return HttpResponse(status=403)
from .forms import NormalCaseForm
form = NormalCaseForm(request.POST)
if form.is_valid():
nc = form.save(commit=False)
nc.case = case
nc.added_by = request.user
nc.save()
# Return the updated toggle fragment and close modal via inline script
is_atlas_editor = request.user.is_superuser or request.user.groups.filter(name="atlas_editor").exists()
is_case_author = case.author.filter(id=request.user.id).exists()
can_mark_normal = is_atlas_editor or is_case_author or request.user.is_superuser
toggle_html = render_to_string(
"atlas/partials/_normal_toggle.html",
{"case": case, "user": request.user, "is_atlas_editor": is_atlas_editor, "is_case_author": is_case_author, "can_mark_normal": can_mark_normal},
request=request,
)
toggle_html += "<script>var m = bootstrap.Modal.getOrCreateInstance(document.getElementById('normal-modal-{}')); if(m) m.hide();</script>".format(case.pk)
return HttpResponse(toggle_html)
else:
# On form errors, re-render the modal with errors
html = render_to_string("atlas/partials/_normal_form.html", {"form": form, "case": case}, request=request)
return HttpResponse(html, status=400)
@login_required
@user_is_author_or_atlas_series_checker_or_atlas_marker_or_open_access
def series_thumbnail_fail(request, pk):