Ross
35 lines
699 B
Python
35 lines
699 B
Python
import os
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from pathlib import Path
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import pydicom
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import dicognito.anonymizer
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import typer
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anonymizer = dicognito.anonymizer.Anonymizer()
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app = typer.Typer()
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def anonymize_file(filepath: Path, new_filepath: Path):
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with pydicom.dcmread(filepath) as dataset:
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anonymizer.anonymize(dataset)
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dataset.save_as(new_filepath)
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return new_filepath
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@app.command()
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def annonymise(filepath: Path, output_dir: Path):
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new_filepath : Path
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# Get next available filename
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i : int = 0
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while os.path.exists(new_filepath := Path(output_dir).joinpath(f"IMG_{i:03}.dcm")):
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i += 1
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anonymize_file(filepath, new_filepath)
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if __name__ == "__main__":
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app()
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